Template:Clade converter
 | This template uses Lua: |
Wikitext list converter[edit]
Converts a list in wikitext marker to the clade structure. The list must be wrapped in <nowiki>...</nowiki> tags.
{{clade converter|list=<nowiki>
* ''Sitta''
** [[Sittelle superbe]] (''S. formosa'')
**
***
**** [[Sittelle des rochers]] (''S. tephronota'')
**** [[Sittelle de Neumayer]] (''S. neumayer'')
***
****
***** [[Sittelle du Cachemire]] (''S. cashmirensis'')
***** '''Sittelle des Naga''' (''S. nagaensis'')
***** [[Sittelle torchepot]] (''S. europaea'')
**** [[Sittelle de l'Himalaya]] (''S. himalayensis'')
</nowiki>
}}
Alternatively invoke function directly:
{{#invoke:Clade|listConverter|list=
PUT LIST HERE
}}
- produces
* ''Sitta''
** [[Sittelle superbe]] (''S. formosa'')
**
***
**** [[Sittelle des rochers]] (''S. tephronota'')
**** [[Sittelle de Neumayer]] (''S. neumayer'')
***
****
***** [[Sittelle du Cachemire]] (''S. cashmirensis'')
***** '''Sittelle des Naga''' (''S. nagaensis'')
***** [[Sittelle torchepot]] (''S. europaea'')
**** [[Sittelle de l'Himalaya]] (''S. himalayensis'')
{{clade
|label1= ''Sitta''
|1={{clade
|1= [[Sittelle superbe]] (''S. formosa'')
|label2=
|2={{clade
|label1=
|1={{clade
|1= [[Sittelle des rochers]] (''S. tephronota'')
|2= [[Sittelle de Neumayer]] (''S. neumayer'')
}}
|label2=
|2={{clade
|label1=
|1={{clade
|1= [[Sittelle du Cachemire]] (''S. cashmirensis'')
|2= '''Sittelle des Naga''' (''S. nagaensis'')
|3= [[Sittelle torchepot]] (''S. europaea'')
}}
|2= [[Sittelle de l'Himalaya]] (''S. himalayensis'')
}}
}}
}}
}}
Newick converter[edit]
Convert simple Newick strings to the clade structure. This is a tool to aid construction of cladograms using the {{clade}} template and not for use directly in the article namespace.
Parameters[edit]
|newickstring=– the Newick format data to be converted|indent=– optionally set an indent, which will indent every line by N spaces. This can help alignment in the final cladogram.
Example[edit]
The following code
{{Template:Clade newick converter
|newickstring=((lion,jaguar,leopard),((siberian,javan,bengal)tiger,snow leopard))panthera
|indent=10
}}
produces the output below
((lion,jaguar,leopard),((siberian,javan,bengal)tiger,snow leopard))panthera
{{clade |label1=panthera |1={{clade |label1= |1={{clade |1=lion |2=jaguar |3=leopard }} |label2= |2={{clade |label1=tiger |1={{clade |1=siberian |2=javan |3=bengal }} |2=snow leopard }} }} }}
Processing the Newick string[edit]
The Newick format data provided Open Tree of Life and other sources typically has extraneous encoding data. This extra information can be removed using the |newickN-pattern= and |newickN-replace= parameters which supply a Lua pattern (similar to Regex) and replacement. The following code uses Newick format data for the genus Prionailurus downloaded from using Open Tree of Life (source data):
{{clade newick converter
|newickstring=(Prionailurus_planiceps_ott86166,(((Prionailurus_bengalensis_chinensis_ott198595,Prionailurus_bengalensis_euptilurus_ott547362,Prionailurus_bengalensis_bengalensis_ott5557509,Prionailurus_bengalensis_rabori_ott7067613)Prionailurus_bengalensis_ott280108,Prionailurus_iriomotensis_ott418475),Prionailurus_viverrinus_ott862641),Prionailurus_rubiginosus_ott507541)Prionailurus_ott570215
|newick-pattern=([%a_]+)_(ott[%d]*)
|newick-replace={{'}}{{'}}%1{{'}}{{'}}
|newick-pattern2=(%a)(%l+)_
|newick-replace2=%1._
}}
produces
(''P. planiceps'',(((''P. b. chinensis'',''P. b. euptilurus'',''P. b. bengalensis'',''P. b. rabori'')''P. bengalensis'',''P. iriomotensis''),''P. viverrinus''),''P. rubiginosus'')''Prionailurus''
{{clade |label1=''Prionailurus'' |1={{clade |1=''P. planiceps'' |label2= |2={{clade |label1= |1={{clade |label1=''P. bengalensis'' |1={{clade |1=''P. b. chinensis'' |2=''P. b. euptilurus'' |3=''P. b. bengalensis'' |4=''P. b. rabori'' }} |2=''P. iriomotensis'' }} |2=''P. viverrinus'' }} |3=''P. rubiginosus'' }} }}
In this example there are two replacements. The first strips the _ott suffix and applies Wikitext markup. Note the Wikitext markup has to be handled with a template ({{'}}) The second abbreviates the genus name when not standalone. In addition, underscores are always replaced by spaces.
List Converter[edit]
Converts a Wikitext-like list to a clade structure. The list uses the symbol @ as the * would be processed as Wikitext.
Example[edit]
The following illustrates the code and the desired output:
| Template call with pseudo-Wikitext list | Output of template as clade code | The cladogram that the code produces | ||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
{{Clade converter
|indent=3
|list=
@A
@@A1
@@A2
@B
@C
@@C1
@@C2
@@@C2a
@@@C2b
@@@@C2b1
@@@@C2b2
@@C3
@D
@@D1
@@D2
}}
|
@A @@A1 @@A2 @B @C @@C1 @@C2 @@@C2a @@@C2b @@@@C2b1 @@@@C2b2 @@C3 @D @@D1 @@D2
{{clade
|label1=A
|1={{clade
|1=A1
|2=A2
}}
|2=B
|label3=C
|3={{clade
|1=C1
|label2=C2
|2={{clade
|1=C2a
|label2=C2b
|2={{clade
|1=C2b1
|2=C2b2
}}
}}
|3=C3
}}
|label4=D
|4={{clade
|1=D1
|2=D2
}}
}} |
|